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    <title>Jack Hellerstedt » Blog</title>
    <link>https://jhell.imipolex.biz/</link>
    <description>Recent blog posts from Jack Hellerstedt</description>
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      <title>Chirality in 2D Metal-Organic Framework</title>
      <link>https://jhell.imipolex.biz/2025/10/20/chirality-in-2d-metal-organic-framework/</link>
      <pubDate>Mon, 20 Oct 2025 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2025/10/20/chirality-in-2d-metal-organic-framework/</guid>
      <description>Another installment in the annals of the bullying of the Shockley surface state, this time the trick isn’t exotic adatoms or massive molecular weight, just a 120° tilt of hexaazatriphenylene (HAT) ligands that converts an achiral lattice into a pair of enantiomeric 2-D metal–organic frameworks. The result: chirality-imposed scattering potentials that lift degeneracies and open ΔE ≈ 80 meV gaps in the Ag(111) two-dimensional electron gas while leaving the global periodicity intact.
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      <content:encoded><![CDATA[<p>Another installment in the annals of the bullying of the Shockley surface state, this time the trick isn’t exotic adatoms or massive molecular weight, just a 120° tilt of hexaazatriphenylene (HAT) ligands that converts an achiral lattice into a pair of enantiomeric 2-D metal–organic frameworks. The result: <strong>chirality-imposed scattering potentials that lift degeneracies and open ΔE ≈ 80 meV gaps</strong> in the Ag(111) two-dimensional electron gas while leaving the global periodicity intact.</p>
<figure class="wp-block-image size-large"><img decoding="async" src="/images/blog/chirality-in-2d-metal-organic-framework/wiley-figure-2.jpg" alt="Figure (hosted locally)"/></figure>
<h3 class="wp-block-heading">Key take-aways</h3>
<ul class="wp-block-list">
<li><strong>Structural chirality prints straight onto <em>k</em>-space</strong><br>nc-AFM resolves two co-existing enantiomers, pinwheel (PW) and “Y” phases, built from Cu–N coordination and an approximately 6° molecular cant relative to the substrate plane. STS maps acquired at 5K reveal the surface-state band dispersion reconstructed by these potentials: back-folded bands, avoided crossings and a pronounced energy gap at the new Brillouin-zone boundary.<br></li>
<li><strong>No new chemistry, only symmetry</strong><br>The gaps appear without changing the molecular building blocks; tilting the HAT plane breaks mirror symmetry and generates the required chiral scattering.<br></li>
<li><strong>Two tools, one story</strong><br>Electronic plane-wave expansion (EPWE) calculations feed the experimental topographies into a scattering potential and reproduce the experimental <em>dI/dV</em> linecuts almost quantitatively. DFT overlays the intrinsic MOF bands, showing that substrate hybridisation broadens the pyrazine and shallow-pore states but leaves the chirality-imposed gap untouched.</li>
</ul>
<h3 class="wp-block-heading">Why it matters</h3>
<p>Tuning interface electronic properties usually means adding heavy metals, strain or strong correlations. Here the knob is <strong>symmetry engineering at the level of a single torsion angle</strong>, giving a gap that survives room-temperature disorder and is addressable by STM patterning. For anyone chasing chiral superconductivity, topological Bloch modes or valley-splitting without magnetic fields, that’s a tantalising new dial to turn, keeping in mind that the circumstances of its rotation are a bit rarefied, and the organics that underpin it aren&#8217;t typically associated the materials systems that carry those clusters of keywords.</p>
<h3 class="wp-block-heading">Acknowledgments</h3>
<p>The project has long roots: <strong><a href="https://www.linkedin.com/in/sebastian-furer/">Sebastian</a></strong> synthesised the first and final HAT batch in-house back in 2019, but that&#8217;s a lot of molecules when you image them by the hundred. The low-temperature data were collected during <strong><a href="https://julianceddia.com">Julian’s</a></strong> PhD tenure, during the LHe heyday when the coarse motor piezos had been beated back into shape (thanks <a href="https://www.linkedin.com/in/benjamin-m-lowe/">Ben</a>). <strong><a href="https://www.linkedin.com/in/bernard-field/">Bernard</a></strong>, now a postdoc at LBNL, nevertheless kept pushing the modelling forward to get this across the finish line.</p>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.1002/sstr.202500422"></div>
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<p>Tuning Interface Electronic Properties via Chiral Two-Dimensional Metal-Organic Frameworks (2025). Small Structures. <a href="https://doi.org/10.1002/sstr.202500422">https://doi.org/10.1002/sstr.202500422</a></p>
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      <title>scanbot</title>
      <link>https://jhell.imipolex.biz/2024/07/16/scanbot/</link>
      <pubDate>Tue, 16 Jul 2024 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2024/07/16/scanbot/</guid>
      <description>Jules has put in the hard yards implementing nanonisTCP as a python module, and leveraged that to create scanbot, a tool for automating the tasks of preparing a good imaging &amp; spectroscopy probe, as well as a suite of functions for performing nuanced, drift-corrected measurements over very long timescales.
See the below example of systematically grid scanning 100x100nm images to concatenate a comprehensive view of the surface. Right is the upper left red corner, where self-assembled molecular islands are visible.
</description>
      <content:encoded><![CDATA[<p>Jules has put in the hard yards implementing <a href="https://github.com/New-Horizons-SPM/nanonisTCP">nanonisTCP</a> as a python module, and leveraged that to create <a href="https://github.com/New-Horizons-SPM/scanbot">scanbot</a>, a tool for automating the tasks of preparing a good imaging &amp; spectroscopy probe, as well as a suite of functions for performing nuanced, drift-corrected measurements over very long timescales.</p>
<p>See the below example of systematically grid scanning 100x100nm images to concatenate a comprehensive view of the surface.  Right is the upper left red corner, where self-assembled molecular islands are visible.</p>
<figure class="wp-block-image size-large"><img decoding="async" src="https://new-horizons-spm.github.io/scanbot/survey.png" alt=""/></figure>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.21105/joss.06028"></div>
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<p>Ceddia et al., (2024). Scanbot: An STM Automation Bot. Journal of Open Source Software, 9(99), 6028, <a href="https://doi.org/10.21105/joss.06028">https://doi.org/10.21105/joss.06028</a></p>
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      <title>Mott transition in kagome MOF</title>
      <link>https://jhell.imipolex.biz/2024/04/30/mott-transition-in-kagome-mof/</link>
      <pubDate>Tue, 30 Apr 2024 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2024/04/30/mott-transition-in-kagome-mof/</guid>
      <description>Ben &amp; Bernard&#8217;s work on the two-dimensional kagome metal-organic framework is out this week (26 April 2024) in Nature Comms.
It was fantastic to see interesting electronic properties emerge at relatively big energy scales for this sort of work, when we were finally able to get the 2d kagome MOF composed of Cu adatoms &amp; DCA molecules, to self-assemble on insulating hexagonal boron nitride (hBN) supported by a Cu111 metallic substrate.
We teamed up with Ben Powell&#8217;s group at UQ for the many-body expertise required to understand the tunnel junction and substrate work function dependent modulations of the electronic gap in the language of Mott physics.
</description>
      <content:encoded><![CDATA[<p><a href="https://www.linkedin.com/in/benjamin-m-lowe/">Ben</a> &amp; <a href="https://www.linkedin.com/in/bernard-field/">Bernard&#8217;s</a> work on the two-dimensional kagome metal-organic framework is out this week (26 April 2024) in <a href="https://www.nature.com/articles/s41467-024-47766-8">Nature Comms</a>.<br><br>It was fantastic to see interesting electronic properties emerge at relatively big energy scales for this sort of work, when we were finally able to get the 2d kagome MOF composed of Cu adatoms &amp; DCA molecules, to self-assemble on insulating hexagonal boron nitride (hBN) supported by a Cu111 metallic substrate.<br><br>We teamed up with <a href="https://scholar.google.com.au/citations?user=O02SbzIAAAAJ&amp;hl=en">Ben Powell&#8217;s</a> <a href="https://people.smp.uq.edu.au/BenPowell/">group at UQ</a> for the many-body expertise required to understand the tunnel junction and substrate work function dependent modulations of the electronic gap in the language of Mott physics.</p>
<figure class="wp-block-image size-full"><img fetchpriority="high" decoding="async" width="800" height="727" src="/images/blog/mott-transition-in-kagome-mof/figure.jpeg" alt="" class="wp-image-294" /></figure>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.1038/s41467-024-47766-8"></div>
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<p>Lowe, B., Field, B., Hellerstedt, J.&nbsp;<em>et al.</em>&nbsp;Local gate control of Mott metal-insulator transition in a 2D metal-organic framework.&nbsp;<em>Nat Commun</em>&nbsp;<strong>15</strong>, 3559 (2024). <a href="https://doi.org/10.1038/s41467-024-47766-8">https://doi.org/10.1038/s41467-024-47766-8</a></p>
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      <title>Striped Phase</title>
      <link>https://jhell.imipolex.biz/2022/11/20/striped-phase/</link>
      <pubDate>Sun, 20 Nov 2022 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2022/11/20/striped-phase/</guid>
      <description>While pursuing metal-organic frameworks, we stumbled on something unexpected but experimentally robust back in June of 2019. DCA molecules and Au adatoms on Ag111 form DCA-Au-DCA units, and the cyano groups aren&#8217;t involved as you&#8217;d intuitively expect.
It took some heroic effort and creative thinking from Adam &amp; the team in Prague to &#8220;just run this one through the computer real quick&#8221;, but nonetheless we&#8217;re pleased to have this explanation of the selective C-H scisson necessary to justify the observed end products.
</description>
      <content:encoded><![CDATA[<p>While pursuing metal-organic frameworks, we stumbled on something unexpected but experimentally robust back in June of 2019.  DCA molecules and Au adatoms on Ag111 form DCA-Au-DCA units, and the cyano groups aren&#8217;t involved as you&#8217;d intuitively expect.</p>
<p>It took some heroic effort and creative thinking from Adam &amp; the team in Prague to &#8220;just run this one through the computer real quick&#8221;, but nonetheless we&#8217;re pleased to have this explanation of the selective C-H scisson necessary to justify the observed end products.</p>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.1021/jacs.2c10154"></div>
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<p>Lowe, B., et. al. (2022). Selective Activation of Aromatic C–H Bonds Catalyzed by Single Gold Atoms at Room Temperature. <em>J. Am. Chem. Soc.</em> <a href="https://doi.org/10.1021/jacs.2c10154">https://doi.org/10.1021/jacs.2c10154</a></p>
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      <title>MgPc ARPES</title>
      <link>https://jhell.imipolex.biz/2022/08/18/mgpc-arpes/</link>
      <pubDate>Thu, 18 Aug 2022 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2022/08/18/mgpc-arpes/</guid>
      <description>We had the opportunity to use the new toroidal analyzer at the Australian synchrotron to do ARPES of self-assembled monolayers of MgPc on Ag100.
Careful simultaneous fitting of different high-symmetry EDC measurements, in concert with the structural understanding gleaned from ncAFM &amp; LEED characterization, allowed us to tease out a feature with bandwidth 20 meV, which was surprising to us given that we did the ARPES at room temperature.
</description>
      <content:encoded><![CDATA[<p>We had the opportunity to use the<a href="https://www.ansto.gov.au/user-access/instruments/australian-synchrotron-beamlines/soft-x-ray-spectroscopy/technical"> new toroidal analyzer at the Australian synchrotron</a> to do <a href="https://en.wikipedia.org/wiki/Angle-resolved_photoemission_spectroscopy">ARPES</a> of self-assembled monolayers of MgPc on Ag100.</p>
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<p>Careful simultaneous fitting of different high-symmetry EDC measurements, in concert with the structural understanding gleaned from ncAFM &amp; LEED characterization, allowed us to tease out a feature with bandwidth 20 meV, which was surprising to us given that we did the ARPES at room temperature.</p>
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<p><a href="https://www.ansto.gov.au/people/dr-bruce-cowie">Bruce Cowie</a> &amp; <a href="https://www.ansto.gov.au/people/dr-anton-tadich">Anton Tadich</a> made it possible to break into this kind of measurement with just a week of time; Anton has been instrumental in supporting the analysis that was required to get this one across the finish line.</p>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.1039/D2NA00385F"></div>
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<p>Hellerstedt, J., et. al. (2022). Direct observation of narrow electronic energy band formation in 2D molecular self-assembly. <em>Nanoscale Advances</em> <a href="https://doi.org/10.1039/D2NA00385F">https://doi.org/10.1039/D2NA00385F</a></p>
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      <title>Counting Molecules</title>
      <link>https://jhell.imipolex.biz/2022/03/09/counting-molecules/</link>
      <pubDate>Wed, 09 Mar 2022 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2022/03/09/counting-molecules/</guid>
      <description>9-azidophenanthrene produces a rich manifold of products when deposited on Ag(111).
The images we took for this study inspired this work to develop a lightweight script to count the molecules we observed, and categorize them.
Our personal journey of computer vision rediscovery led us to Zernike moments, a rotationally invariant basis set that solves the problem of identifying the same molecules with relative rotations, in an image.
We put some effort into making this module user-friendly, the example scripts offer a reasonable template to apply to any old SXM file you might want to histogram.
</description>
      <content:encoded><![CDATA[<p><a href="https://pubchem.ncbi.nlm.nih.gov/compound/9-Azidophenanthrene">9-azidophenanthrene</a> produces a <a href="http://doi.org/10.1002/anie.201812334">rich manifold of products</a> when deposited on Ag(111).<br><br>The images we took for this study inspired this work to develop a lightweight script to count the molecules we observed, and categorize them.<br><br>Our personal journey of computer vision rediscovery led us to <a href="https://en.wikipedia.org/wiki/Zernike_polynomials">Zernike moments</a>, a rotationally invariant basis set that solves the problem of identifying the same molecules with relative rotations, in an image.<br><br>We put some effort into making <a href="https://github.com/thennen/counting-molecules">this module</a> user-friendly, the <a href="https://github.com/thennen/counting-molecules/tree/master/examples">example scripts</a> offer a reasonable template to apply to any old SXM file you might want to histogram.</p>
<figure class="wp-block-image size-large"><img fetchpriority="high" decoding="async" width="1024" height="513" src="/images/blog/counting-molecules/apt-044.png" alt="" class="wp-image-214" /></figure>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.1016/j.simpa.2022.100301"></div>
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<p>Hellerstedt, J., et. al. (2022). Counting Molecules: Python based scheme for automated enumeration and categorization of molecules in scanning tunneling microscopy images. <em>Software Impacts</em> <a href="https://doi.org/10.1016/j.simpa.2022.100301">https://doi.org/10.1016/j.simpa.2022.100301</a></p>
<p><a href="https://github.com/thennen/counting-molecules">github repo</a></p>
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      <title>2021 AIP summer meeting</title>
      <link>https://jhell.imipolex.biz/2021/12/13/2021-aip-summer-meeting/</link>
      <pubDate>Mon, 13 Dec 2021 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2021/12/13/2021-aip-summer-meeting/</guid>
      <description>The AIP summer meeting was a hybrid event this year 6-9 Dec. &#8217;21 with the border restrictions still in place preventing us from travelling to Brisbane.
Iolanda kindly invited me to talk about Marina&#8217;s MgPc hybridization work as well as new results of orbital tomography performed at the Australian Synchrotron (in preparation).
Ben Lowe contributed a talk to the scanning probe microscopy focus session, with an update on how we&#8217;re closing in on understanding the mechanism of formation for some unusual metal-organic products identified with ncAFM measurements.
Thanks also to Peggy Schönherr, Peggy Zhang, Peter Jacobson, and Iolanda DiBernardo for contributing talks to the SPM focus session.
Bernard Field talked about how he&#8217;s pushing forward how we can rationalise our observations of self-assembled MOF structures, stemming from our recently published experimental results that Agustin talked about in the MOF focus session.
</description>
      <content:encoded><![CDATA[<p>The <a rel="noreferrer noopener" href="https://aip-summer-meeting.com/" target="_blank">AIP summer meeting</a> was a hybrid event this year 6-9 Dec. &#8217;21 with the border restrictions still in place preventing us from travelling to Brisbane.<br><br><a rel="noreferrer noopener" href="https://scholar.google.com/citations?user=G9WqskcAAAAJ&amp;hl=en" target="_blank">Iolanda</a> kindly invited me to talk about <a rel="noreferrer noopener" href="/2021/02/13/mgpc-mgpc-hybridization/" target="_blank">Marina&#8217;s MgPc hybridization work</a> as well as new results of <a rel="noreferrer noopener" href="https://www.science.org/cgi/doi/10.1126/science.1176105" target="_blank">orbital tomography</a> performed at the <a rel="noreferrer noopener" href="https://www.ansto.gov.au/research/facilities/australian-synchrotron/overview" target="_blank">Australian Synchrotron</a> (in preparation).<br><br><a rel="noreferrer noopener" href="https://au.linkedin.com/in/benjamin-m-lowe" target="_blank">Ben Lowe</a> contributed a talk to the scanning probe microscopy focus session, with an update on how we&#8217;re closing in on understanding the mechanism of formation for some unusual metal-organic products identified with <a href="https://en.wikipedia.org/wiki/Non-contact_atomic_force_microscopy" target="_blank" rel="noreferrer noopener">ncAFM</a> measurements.<br><br>Thanks also to <a rel="noreferrer noopener" href="https://au.linkedin.com/in/peggy-sch%C3%B6nherr-37a41214a" target="_blank">Peggy Schönherr</a>, <a rel="noreferrer noopener" href="https://scholar.google.com/citations?user=UfDFTz0AAAAJ&amp;hl=en" target="_blank">Peggy Zhang</a>, <a rel="noreferrer noopener" href="https://smp.uq.edu.au/profile/7359/peter-jacobson" target="_blank">Peter Jacobson</a>, and <a rel="noreferrer noopener" href="https://scholar.google.com/citations?user=G9WqskcAAAAJ&amp;hl=en" target="_blank">Iolanda DiBernardo</a> for contributing talks to the SPM focus session.<br><br><a rel="noreferrer noopener" href="https://au.linkedin.com/in/bernard-field-808453209" target="_blank">Bernard Field</a> talked about how he&#8217;s pushing forward how we can rationalise our observations of self-assembled MOF structures, stemming from our <a href="/2021/09/13/kagome-metal-organic-framework/">recently published experimental results</a> that <a rel="noreferrer noopener" href="https://nano.physics.monash.edu/" target="_blank">Agustin</a> talked about in the MOF focus session.<br><br></p>
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      <title>Kagome metal-organic framework</title>
      <link>https://jhell.imipolex.biz/2021/09/13/kagome-metal-organic-framework/</link>
      <pubDate>Mon, 13 Sep 2021 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2021/09/13/kagome-metal-organic-framework/</guid>
      <description> Dhaneesh Kumar has extensively studied the on-surface properties of the DCA molecule for his PhD. After getting a good handle on just the DCA on Ag111, we started sprinkling some Cu atoms into the mix.
We observed the same honeycomb kagome structure that forms on Cu111&#8211; as seen in an ncAFM force volume shown in the right image. It has also been synthesized on graphene.
The key difference we observed on Ag111 was the Kondo effect, an STS peak at Fermi we tracked up to 150 K!
The consistent spatial distribution of this feature across the MOF was another key observation.
</description>
      <content:encoded><![CDATA[<div class="post-thumbnail">
			<img width="825" height="510" src="/images/blog/kagome-metal-organic-framework/kagome-mof-schematic.png" class="attachment-post-thumbnail size-post-thumbnail wp-post-image" alt="DCA Cu Kagome schematic" decoding="async" fetchpriority="high" />	</div>
<p><a href="https://scholar.google.com/citations?user=zHayFesAAAAJ&amp;hl=en&amp;oi=ao" data-type="URL" data-id="https://scholar.google.com/citations?user=zHayFesAAAAJ&amp;hl=en&amp;oi=ao">Dhaneesh Kumar</a> has extensively studied the on-surface properties of the <a href="https://pubchem.ncbi.nlm.nih.gov/compound/9_10-Dicyanoanthracene" data-type="URL" data-id="https://pubchem.ncbi.nlm.nih.gov/compound/9_10-Dicyanoanthracene">DCA molecule</a> for <a href="https://bridges.monash.edu/articles/thesis/Atomically_Engineered_Electronic_Two-Dimensional_Organic_Nanostructures/14493825" data-type="URL" data-id="https://bridges.monash.edu/articles/thesis/Atomically_Engineered_Electronic_Two-Dimensional_Organic_Nanostructures/14493825">his PhD</a>. After getting a good handle on <a rel="noreferrer noopener" href="http://doi.org/10.1021/acsnano.9b05950" target="_blank">just the DCA on Ag111</a>, we started sprinkling some Cu atoms into the mix.</p>
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<p>We observed the same honeycomb kagome structure that <a rel="noreferrer noopener" href="http://doi.wiley.com/10.1002/anie.200802543" target="_blank">forms on Cu111</a>&#8211; as seen in an <a href="https://en.wikipedia.org/wiki/Non-contact_atomic_force_microscopy">ncAFM</a> <a href="http://doi.org/10.1103/PhysRevLett.115.076101">force volume</a> shown in the right image. It has also been <a rel="noreferrer noopener" href="https://onlinelibrary.wiley.com/doi/full/10.1002/adfm.202100519" target="_blank">synthesized on graphene.</a><br><br>The key difference we observed on Ag111 was the <a href="https://en.wikipedia.org/wiki/Kondo_effect">Kondo effect</a>, an <a href="https://en.wikipedia.org/wiki/Scanning_tunneling_spectroscopy">STS peak</a> at Fermi we tracked up to 150 K!<br><br>The consistent spatial distribution of this feature across the MOF was another key observation.</p>
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<figure class="wp-block-image size-full"><img decoding="async" width="482" height="483" src="/images/blog/kagome-metal-organic-framework/dca-force-volume.gif" alt="" class="wp-image-124"/><figcaption>ncAFM force volume of DCA (structure superimposed upper right) self-assembly on Cu111 surface. dZ denotes lift of sensor away from surface for each frame.</figcaption></figure>
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<p><a href="https://au.linkedin.com/in/bernard-field-808453209">Bernard</a> put in the hard yards with DFT/ +U calculations in conjunction with mean-field Hubbard modelling to rationalise our experimental observations as strong Coulomb interactions between electrons within the kagome MOF.</p>
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<figure class="wp-block-image size-full is-resized"><img decoding="async" src="/images/blog/kagome-metal-organic-framework/sts-maps.gif" alt="STS maps" class="wp-image-106" width="335" height="335"/><figcaption>d<a rel="noreferrer noopener" href="https://en.wikipedia.org/wiki/Scanning_tunneling_spectroscopy" target="_blank">I/dV STS mapping</a> at biases indicated upper left</figcaption></figure>
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<figure class="wp-block-image size-large"><img loading="lazy" decoding="async" width="1024" height="946" src="/images/blog/kagome-metal-organic-framework/kagome-mof-schematic.png" alt="DCA Cu Kagome schematic" class="wp-image-132" /><figcaption>Schematic of Kondo screened spin moments within the MOF. Blender by <a href="https://scholar.google.com/citations?user=zHayFesAAAAJ&amp;hl=en&amp;oi=ao">Dhaneesh</a></figcaption></figure>
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<p>We&#8217;re excited by the possibilities for solid-state architectures to offer further access &amp; control of these intriguing quantum states.</p>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.1002/adfm.202106474"></div>
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<p>Kumar, D., et. al. (2021). Manifestation of Strongly Correlated Electrons in a 2D Kagome Metal–Organic Framework. <em>Advanced Functional Materials</em>, 2106474. <a href="https://doi.org/10.1002/adfm.202106474">https://doi.org/10.1002/adfm.202106474</a></p>
<p><a href="https://arxiv.org/abs/2104.11431">ArXiv link</a><br><a href="https://archive.fleet.org.au/blog/star-attraction-magnetism-generated-in-2d-organic-material-by-star-like-arrangement-of-molecules/">FLEET blog</a></p>
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      <title>Concerted Proton Transfer</title>
      <link>https://jhell.imipolex.biz/2021/05/26/concerted-proton-transfer/</link>
      <pubDate>Wed, 26 May 2021 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2021/05/26/concerted-proton-transfer/</guid>
      <description>We stumbled on a very curious observation in the summer of 2018 with DABQDI molecules provided by Olivier Siri&#8216;s team.
ncAFM image of 26 molecule chain. Unfiltered data. Repeated manipulations with STM tip are capable of dragging a DABQDI chain around the Au111 surface. While evaluating its experimental suitability for 1d coordination with metals, which has already proven to be fruitful, we noticed the molecules forming chain-like structures even before we introduced metal adatoms.
The low temperature SPM results are sublime: unusual mechanical stability, distinctive intermolecular bonding, and near-Fermi electronic states lighting up at the ends of the chains.
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      <content:encoded><![CDATA[<p>We stumbled on a very curious observation in the summer of 2018 with <a href="http://doi.org/10.1016/j.ccr.2017.06.015">DABQDI</a> molecules provided by <a href="http://www.cinam.univ-mrs.fr/cinam/le-centre/annuaire/fiche-personnel/?idu=168">Olivier Siri</a>&#8216;s team.</p>
<figure class="wp-block-image size-large"><img fetchpriority="high" decoding="async" width="774" height="76" src="/images/blog/concerted-proton-transfer/dabqdi-chain-ncafm.png" alt="" class="wp-image-93" /><figcaption>ncAFM image of 26 molecule chain. Unfiltered data.</figcaption></figure>
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<figure class="wp-block-image size-large is-resized"><img decoding="async" src="/images/blog/concerted-proton-transfer/dabqdi-stm-manipulation.gif" alt="STM chain manipulation" class="wp-image-91" width="327" height="327"/><figcaption>Repeated manipulations with STM tip are capable of dragging a DABQDI chain around the Au111 surface.</figcaption></figure>
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<p>While evaluating its experimental suitability for 1d coordination with metals, <a href="http://doi.org/10.1002/anie.202011462">which has already proven to be fruitful</a>, we noticed the molecules forming chain-like structures even before we introduced metal adatoms.<br><br>The low temperature SPM results are sublime: unusual mechanical stability, distinctive intermolecular bonding, and near-Fermi electronic states lighting up at the ends of the chains.</p>
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<p>It took an extraordinary cast of theorists hailing from <a href="https://nanosurf.fzu.cz/">Pavel&#8217;s core group</a>, <a href="https://www.fzu.cz/lide/dr-karel-vyborny">FZU</a>, <a href="https://scholar.google.com/citations?user=EcEE4CAAAAAJ&amp;hl=en">Charles</a>, <a href="https://scholar.google.is/citations?user=mPhOvGcAAAAJ&amp;hl=en">Reykjavik</a>, &amp; <a href="https://dep.ftmc.uam.es/members/all-members/name/diego-soler-polo/">Madrid</a> Universities to unravel this puzzle and explain these observations as concerted proton tunneling causing a delocalization of electrons.</p>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.1021/acsnano.1c02572"></div>
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<p>&#8220;Significance of Nuclear Quantum Effects in Hydrogen Bonded Molecular Chains&#8221;, ACS Nano, 2021. <a href="http://doi.org/10.1021/acsnano.1c02572">10.1021/acsnano.1c02572</a></p>
<p><a href="https://arxiv.org/abs/2007.14657">ArXiv link</a></p>
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      <title>March Meeting 2021</title>
      <link>https://jhell.imipolex.biz/2021/03/12/march-meeting-2021/</link>
      <pubDate>Fri, 12 Mar 2021 12:00:00 &#43;1000</pubDate>
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      <description>I&#8217;m presenting Marina&#8217;s work on MgPc hybridization in Focus Session B56 on Monday 15/3 at 1318 (CDT).
Link to my presentation slides.
Other talks from our group:
Dhaneesh Kumar, &#8220;Kondo Effect in a 2D Kagome Metal-organic Framework on a Metal&#8221; (15/3 1218 CDT)
Bernard Field, &#8220;Electronic and Magnetic Structure of Metal-Organic Lattices on Substrates&#8221; (15/3 1242 CDT)
Ben Lowe, &#8220;Atomic-Scale Evidence of Surface-Catalyzed Gold-Carbon Covalent Bonding&#8221; (18/3 1206 CDT)
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      <content:encoded><![CDATA[<p>I&#8217;m presenting <a href="/2021/02/13/mgpc-mgpc-hybridization/">Marina&#8217;s work on MgPc hybridization</a> in <a href="https://meetings.aps.org/Meeting/MAR21/Session/B56.8">Focus Session B56</a> on Monday 15/3 at 1318 (CDT).<br><br><a href="https://docs.google.com/presentation/d/14CQ1wawSgZJtLqBjrY4Tv9_yqapIgrwn6TGzDFIq7CY/edit?usp=sharing">Link to my presentation slides.</a><br><br>Other talks from our group:<br><a href="https://scholar.google.com/citations?user=zHayFesAAAAJ&amp;hl=en&amp;oi=ao" target="_blank" rel="noreferrer noopener">Dhaneesh Kumar</a>, <a href="https://meetings.aps.org/Meeting/MAR21/Session/B56.3">&#8220;Kondo Effect in a 2D Kagome Metal-organic Framework on a Metal&#8221;</a> (15/3 1218 CDT)<br><br>Bernard Field, <a href="https://meetings.aps.org/Meeting/MAR21/Session/B56.5">&#8220;Electronic and Magnetic Structure of Metal-Organic Lattices on Substrates&#8221;</a> (15/3 1242 CDT)<br><br>Ben Lowe, <a href="https://meetings.aps.org/Meeting/MAR21/Session/S56.4">&#8220;Atomic-Scale Evidence of Surface-Catalyzed Gold-Carbon Covalent Bonding&#8221;</a> (18/3 1206 CDT)<br></p>
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      <title>MgPc-MgPc Hybridization</title>
      <link>https://jhell.imipolex.biz/2021/02/13/mgpc-mgpc-hybridization/</link>
      <pubDate>Sat, 13 Feb 2021 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2021/02/13/mgpc-mgpc-hybridization/</guid>
      <description> nc-AFM atomic registration of single MgPc molecule on Ag100 (surface atoms top and bottom stripes) Marina Castelli studied the phthalocyanine containing magnesium (MgPc) via 5K scanned probe microscopies extensively during her PhD.
&#8216;Routine&#8217; STM characterisation showed that the molecules were interacting with one another on the Ag100 surface.
ncAFM showed identical contrast for all molecules, pointing to an electronic origin to the observed changes in appearance.
Our key observation was to track the shape of the occupied LUMO for different pairwise distances, an electronic feature that otherwise remained isoenergetic.
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<figure class="wp-block-image size-large"><img fetchpriority="high" decoding="async" width="683" height="1024" src="/images/blog/mgpc-mgpc-hybridization/mgpc-ncafm-registration.png" alt="ncAFM atomic registration of MgPc molecule on Ag100" class="wp-image-44" /><figcaption>nc-AFM atomic registration of single MgPc molecule on Ag100 (surface atoms top and bottom stripes)</figcaption></figure>
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<p>Marina Castelli studied the <a rel="noreferrer noopener" href="https://en.wikipedia.org/wiki/Phthalocyanine" target="_blank">phthalocyanine</a> containing magnesium (MgPc) via 5K scanned probe microscopies extensively during her <a rel="noreferrer noopener" href="https://doi.org/10.26180/5f598923d1e83" target="_blank">PhD.</a><br><br>&#8216;Routine&#8217; STM characterisation showed that the molecules were interacting with one another on the Ag100 surface.<br><br><a rel="noreferrer noopener" href="https://en.wikipedia.org/wiki/Non-contact_atomic_force_microscopy" target="_blank">ncAFM</a> showed identical contrast for all molecules, pointing to an electronic origin to the observed changes in appearance.<br><br>Our key observation was to track the <em>shape</em> of the occupied LUMO for different pairwise distances, an electronic feature that otherwise remained isoenergetic.</p>
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<p>With multipass dI/dV mapping we were able to quantitatively track from four- to two-fold rotational symmetry, over distances out to ~3 nm.  We found the spatial extent of this attractive hybridization quite surprising.</p>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.1002/smll.202005974"></div>
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<p>“Long-Range Surface-Assisted Molecule-Molecule Hybridization”,&nbsp;<em>Small</em> (2021). <a rel="noreferrer noopener" href="https://onlinelibrary.wiley.com/doi/full/10.1002/smll.202005974" target="_blank">10.1002/smll.202005974</a></p>
<p><a rel="noreferrer noopener" href="https://archive.fleet.org.au/blog/harnessing-socially-distant-molecular-interactions-for-future-computing/" target="_blank">FLEET PR</a><br><a rel="noreferrer noopener" href="https://arxiv.org/abs/2011.06712" target="_blank">ArXiv link</a></p>
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<figure class="wp-block-image size-large"><img decoding="async" width="1024" height="1024" src="/images/blog/mgpc-mgpc-hybridization/mgpc-stm-neighbor-symmetry.png" alt="STM image of MgPc molecules on Ag100 surface" class="wp-image-45" /><figcaption>STM image showing the neighbor-induced symmetry reduction</figcaption></figure>
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      <title>Thin-film Dirac semimetal review article</title>
      <link>https://jhell.imipolex.biz/2021/02/05/thin-film-dirac-semimetal-review-article/</link>
      <pubDate>Fri, 05 Feb 2021 12:00:00 &#43;1000</pubDate>
      <guid>https://jhell.imipolex.biz/2021/02/05/thin-film-dirac-semimetal-review-article/</guid>
      <description>Iolanda DiBernardo reviewed the development of Na3Bi as a topological electronic material.
The physics of Dirac semimetals (&#8220;3d graphene&#8221;) is introduced, and the results from the last half decade are tied together in one narrative, in particular our work at Monash demonstrating that Na3Bi grows directly on insulators, and that indeed an electric field will open a topological gap, two key ingredients to achieving a working &#8220;topological transistor&#8221;.
&#8220;Progress in Epitaxial Thin‐Film Na3Bi as a Topological Electronic Material&#8221;, Advanced Materials, 2021. 10.1002/adma.202005897
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      <content:encoded><![CDATA[<p><a rel="noreferrer noopener" href="https://scholar.google.com/citations?user=G9WqskcAAAAJ&amp;hl=en" target="_blank">Iolanda DiBernardo</a> reviewed the development of Na<sub>3</sub>Bi as a topological electronic material.<br><br>The physics of Dirac semimetals (&#8220;3d graphene&#8221;) is introduced, and the results from the last half decade are tied together in one narrative, in particular our work at Monash demonstrating that <a rel="noreferrer noopener" href="http://pubs.acs.org/doi/abs/10.1021/acs.nanolett.6b00638" target="_blank">Na<sub>3</sub>Bi grows directly on insulators</a>, and that indeed an <a rel="noreferrer noopener" href="http://www.nature.com/articles/s41586-018-0788-5" target="_blank">electric field will open a topological gap</a>, two key ingredients to achieving a working &#8220;topological transistor&#8221;.</p>
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<script type="text/javascript" src="https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js"></script><div class="altmetric-embed" data-badge-type="donut" data-doi="10.1002/adma.202005897"></div>
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<p>&#8220;Progress in Epitaxial Thin‐Film Na<sub>3</sub>Bi as a Topological Electronic Material&#8221;, Advanced Materials, 2021. <a rel="noreferrer noopener" href="https://onlinelibrary.wiley.com/doi/abs/10.1002/adma.202005897" target="_blank">10.1002/adma.202005897</a></p>
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